Basic Information
Locus ID:
Ftri16G31405
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 101844912 | 101845493 | + | Ftri16G31405 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 15,772.01 Da | 42.55 | 95.48 | 0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 111 | 3.34964E-30 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 58 | 101 | 2.5E-6 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 112 | 3.71E-23 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 116 | 9.4E-21 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 113 | 23.656193 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022000683.1 | blue copper protein [Helianthus annuus] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A251SUB9 | Putative cupredoxin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0398831 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology