Basic Information
Locus ID:
Ftri16G28894
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 723751 | 725105 | - | Ftri16G28894 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 46,949.86 Da | 39.16 | 83.24 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 78 | 420 | 1.08331E-75 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 79 | 247 | 5.4E-49 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 271 | 416 | 8.0E-26 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 79 | 420 | 4.12E-84 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 250 | 422 | 1.0E-46 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 67 | 248 | 2.5E-45 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 76 | 416 | 40.271202 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 302 | 313 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_022041641.1 | aspartic proteinase CDR1 [Helianthus annuus] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LHM3 | Peptidase A1 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_42485 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology