Basic Information
Locus ID:
Ftri16G13372
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 98901951 | 98905264 | - | Ftri16G13372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 68,251.43 Da | 43.51 | 103.79 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 67 | 100 | 2.3E-6 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 527 | 548 | 1.1 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 233 | 257 | 8.9E-4 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 259 | 282 | 0.099 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 168 | 413 | 9.42E-36 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 338 | 635 | 2.94E-29 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 62 | 102 | 5.63E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 436 | 520 | 2.3E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 106 | 431 | 1.4E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 527 | 635 | 1.5E-15 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 60 | 105 | 3.5E-6 | - |
| SMART | SM00367 | LRR_CC_2 | 392 | 417 | 130.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 340 | 365 | 4.6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 551 | 575 | 2.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 498 | 523 | 36.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 234 | 259 | 6.4E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 260 | 285 | 1.0E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 603 | 628 | 130.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 366 | 391 | 9.7E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 577 | 602 | 41.0 | IPR006553 |
| SMART | SM00256 | fbox_2 | 69 | 110 | 0.0065 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 471 | 496 | 9.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 208 | 233 | 0.0015 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 525 | 550 | 0.24 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 182 | 207 | 0.0091 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 445 | 470 | 10.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_022001029.1 | EIN3-binding F-box protein 1 [Helianthus annuus] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251STA2 | Putative EIN3-binding F box protein 1 OS=Helianthus annuus OX=4232 GN=EBF1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology