Basic Information
Locus ID:
Ftri16G05516
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 104090656 | 104093724 | - | Ftri16G05516 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 53,391.16 Da | 40.63 | 84.50 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 367 | 436 | 1.3E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 30 | 348 | 2.5E-74 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 30 | 349 | 1.19E-76 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 455 | 9.7E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 29 | 354 | 1.9E-108 | - |
| SMART | SM00768 | X8_cls | 365 | 450 | 5.7E-43 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_022001266.1 | glucan endo-1,3-beta-glucosidase 4 [Helianthus annuus] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251SSC9 | Putative glycoside hydrolase family 17, X8 domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0405301 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology