Basic Information
Locus ID:
Ftri16G05406
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 101841337 | 101841802 | + | Ftri16G05406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 13,623.58 Da | 12.33 | 91.19 | 0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 124 | 4.03183E-43 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 114 | 2.3E-24 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 124 | 8.53E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 126 | 4.1E-33 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 126 | 37.199726 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_022003616.1 | blue copper protein [Helianthus annuus] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A251SRL8 | Putative cupredoxin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr13g0398851 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology