Basic Information
Locus ID:
Ftri15G30766
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 6907581 | 6910135 | - | Ftri15G30766 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.44 | 54,886.58 Da | 55.35 | 57.07 | -1.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 455 | 486 | 3.6E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 354 | 438 | 4.1E-18 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 354 | 439 | 2.1E-29 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 312 | - | - |
| Coils | Coil | Coil | 392 | 412 | - | - |
| Coils | Coil | Coil | 346 | 380 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_022034427.1 | uncharacterized protein LOC110936367 [Helianthus annuus] | 0 |
| TrEMBL | A0A251V062 | Putative HIT zinc finger, PAPA-1-like conserved region OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0106191 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology