Basic Information
Locus ID:
Ftri15G29821
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Proteinaceous RNase P 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 113430166 | 113435013 | - | Ftri15G29821 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 65,498.12 Da | 50.48 | 75.98 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 347 | 573 | 9.0E-70 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 99 | 306 | 4.8E-66 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 106 | 576 | 4.9E-222 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 365 | 539 | 4.9E-222 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 106 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_021993610.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial [Helianthus annuus] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TBF9 | ribonuclease P OS=Helianthus annuus OX=4232 GN=PRORP1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology