Basic Information
Locus ID:
Ftri15G24903
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 115003457 | 115004313 | + | Ftri15G24903 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 29,412.06 Da | 53.60 | 82.50 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 162 | 205 | 9.84795E-17 | - |
| Pfam | PF13639 | Ring finger domain | 162 | 205 | 1.1E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 159 | 212 | 1.36E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 132 | 214 | 4.4E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 163 | 204 | 3.5E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 163 | 205 | 12.976127 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 272 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33565.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_024967303.1 | RING-H2 finger protein ATL54-like [Cynara cardunculus var. scolymus] | 0 |
| Q8LFY8 | RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6M080 | RING-type E3 ubiquitin transferase OS=Mikania micrantha OX=192012 GN=E3N88_35179 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology