Basic Information
Locus ID:
Ftri15G15711
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Domain of unknown function (DUF3403)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 118947602 | 118948390 | + | Ftri15G15711 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 13,360.02 Da | 52.57 | 83.98 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 80 | 123 | 3.0E-10 | IPR021820 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 45 | 5.2E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 99 | 7.23E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 81 | 4.2E-15 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 123 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27300.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_021993176.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Helianthus annuus] | 0 |
| O81833 | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana OX=3702 GN=SD11 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TA92 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0332061 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg58674 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl61814 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120112420 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G15711 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1507 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58424 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000003l.132 |
| Salicaceae | Populus euphratica | 1 | populus_peu37425 |