Basic Information
Locus ID:
Ftri15G13790
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 117603004 | 117610070 | + | Ftri15G13790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 46,416.96 Da | 44.44 | 91.19 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 317 | 391 | 4.7E-11 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 120 | 310 | 8.1E-33 | IPR002524 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 315 | 391 | 4.71E-15 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 113 | 312 | 1.7E-41 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 314 | 392 | 6.5E-16 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 115 | 310 | 4.8E-43 | IPR027469 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 118 | 391 | 5.1E-30 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16310.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_043618934.1 | metal tolerance protein 9-like [Erigeron canadensis] | 0 |
| Q0WU02 | Metal tolerance protein 10 OS=Arabidopsis thaliana OX=3702 GN=MTP10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2U1KLI5 | Cation efflux protein OS=Artemisia annua OX=35608 GN=CTI12_AA588480 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology