Basic Information
Locus ID:
Ftri15G13201
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 598936 | 602553 | + | Ftri15G13201 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 40,435.29 Da | 44.79 | 83.20 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 234 | 304 | 4.2E-22 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 2 | 216 | 4.7E-48 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 2 | 216 | 2.97E-51 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 1 | 223 | 2.0E-70 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 227 | 339 | 7.8E-13 | - |
| SMART | SM00768 | X8_cls | 233 | 318 | 1.4E-49 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 131 | 144 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_022036888.1 | glucan endo-1,3-beta-glucosidase 1 [Helianthus annuus] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A251ULM7 | Putative O-Glycosyl hydrolases family 17 protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr05g0129401 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology