Basic Information
Locus ID:
Ftri15G06271
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 3724330 | 3726677 | - | Ftri15G06271 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 48,762.84 Da | 44.77 | 85.34 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 92 | 184 | 2.8E-18 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 269 | 313 | 1.5E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 266 | 328 | 1.7E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 262 | 329 | 5.2E-17 | IPR036638 |
| SMART | SM00353 | finulus | 270 | 319 | 2.0E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 264 | 313 | 16.570694 | IPR011598 |
| Coils | Coil | Coil | 303 | 330 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_021969708.1 | transcription factor MYC2 isoform X1 [Helianthus annuus] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6NQS8 | BHLH domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_17027 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology