Basic Information
Locus ID:
Ftri15G04347
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 9581938 | 9588361 | - | Ftri15G04347 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 107,401.07 Da | 41.60 | 79.96 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 698 | 955 | 2.10057E-108 | - |
| CDD | cd06410 | PB1_UP2 | 134 | 230 | 4.49757E-45 | - |
| Pfam | PF00564 | PB1 domain | 147 | 229 | 9.4E-20 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 694 | 955 | 1.8E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 683 | 954 | 1.52E-75 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 146 | 232 | 5.89E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 780 | 970 | 1.3E-54 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 149 | 231 | 4.8E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 685 | 779 | 1.0E-24 | - |
| SMART | SM00220 | serkin_6 | 692 | 962 | 5.6E-57 | IPR000719 |
| SMART | SM00666 | PB1_new | 145 | 230 | 5.3E-31 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 692 | 962 | 40.894623 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 817 | 829 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 698 | 723 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 926 | 948 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 882 | 904 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 774 | 787 | 3.5E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 811 | 829 | 3.5E-14 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_022034841.1 | RGS domain-containing serine/threonine-protein kinase A isoform X2 [Helianthus annuus] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251UYE7 | Putative PB1 domain, Protein kinase-like domain protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr04g0110611 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology