Basic Information
Locus ID:
Ftri15G03900
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 119770111 | 119774082 | + | Ftri15G03900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 73,589.52 Da | 49.72 | 82.48 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 289 | 3.56E-16 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 504 | 608 | 3.3E-14 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 300 | 7.1E-22 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 478 | 612 | 5.3E-39 | IPR015943 |
| SMART | SM00320 | WD40_4 | 489 | 533 | 0.82 | IPR001680 |
| SMART | SM00320 | WD40_4 | 544 | 583 | 26.0 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 293 | 8.937648 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53090.5 | - | 0 |
| RefSeq | XP_024965362.1 | protein SPA1-RELATED 4-like [Cynara cardunculus var. scolymus] | 0 |
| Q94BM7 | Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LYX1 | WD_REPEATS_REGION domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_34710 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology