Basic Information
Locus ID:
Ftri15G00353
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
60s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 7301150 | 7304174 | - | Ftri15G00353 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.22 | 21,068.52 Da | 44.63 | 86.52 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 2 | 186 | 2.8E-94 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 21 | 139 | 3.92E-27 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 187 | 2.0E-100 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 187 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27850.1 | Ribosomal protein L18e/L15 superfamily protein. | 0 |
| RefSeq | XP_023744601.1 | 60S ribosomal protein L18-3 [Lactuca sativa] | 0 |
| Q940B0 | Large ribosomal subunit protein eL18x OS=Arabidopsis thaliana OX=3702 GN=RPL18C PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6M4L0 | Ribosomal_L18e/L15P domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_36562 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology