Basic Information
Locus ID:
Ftri14G32204
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 5434951 | 5440080 | + | Ftri14G32204 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 101,423.49 Da | 47.54 | 65.06 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 790 | 832 | 1.35144E-4 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 787 | 828 | 8.53E-7 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 28 | 263 | 8.06E-7 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 777 | 836 | 1.2E-10 | - |
| SMART | SM00333 | TUDOR_7 | 785 | 844 | 3.4E-5 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 861 | 889 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 475 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 381 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 892 | 921 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 777 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 747 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 848 | 921 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 382 | 400 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_022029341.1 | titin homolog isoform X4 [Helianthus annuus] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VCA0 | Putative armadillo-type fold protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0084891 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology