Basic Information
Locus ID:
Ftri14G31607
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
ATP binding kinase protein kinase protein serine threonine kinase
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 7902523 | 7905724 | + | Ftri14G31607 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.08 | 86,572.56 Da | 41.94 | 90.44 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 25 | 293 | 1.1E-42 | IPR001245 |
| Pfam | PF14299 | Phloem protein 2 | 592 | 746 | 2.8E-12 | IPR025886 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 298 | 1.2E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 99 | 2.1E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 101 | 312 | 3.4E-49 | - |
| SMART | SM00220 | serkin_6 | 21 | 296 | 2.5E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 303 | 34.20924 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 52 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 143 | 155 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24790.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_035844243.1 | uncharacterized protein LOC118490601 isoform X1 [Helianthus annuus] | 0 |
| Q9LRY1 | Probable serine/threonine-protein kinase PBL25 OS=Arabidopsis thaliana OX=3702 GN=PBL25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2J6LLV6 | Protein kinase domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_6X77540 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 30 | Ftri11G25505, Ftri12G15517, Ftri14G01992, Ftri14G04619 ... |