Basic Information
Locus ID:
Ftri14G30070
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 3277610 | 3281161 | + | Ftri14G30070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 29,029.07 Da | 17.18 | 100.00 | 0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 140 | 211 | 7.01702E-29 | - |
| CDD | cd04216 | Phytocyanin | 24 | 107 | 3.71797E-35 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 154 | 214 | 4.2E-15 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 38 | 107 | 1.9E-20 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 107 | 1.78E-25 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 139 | 215 | 2.84E-20 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 118 | 1.6E-26 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 138 | 225 | 1.7E-20 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 140 | 266 | 22.752817 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 128 | 28.550074 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32300.1 | uclacyanin 1. Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. | 0 |
| RefSeq | XP_040990424.1 | blue copper protein 1a-like [Juglans microcarpa x Juglans regia] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A103XJK7 | Cupredoxin OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_006064 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology