Basic Information
Locus ID:
Ftri14G28595
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 12510281 | 12516246 | + | Ftri14G28595 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 67,904.97 Da | 36.63 | 90.24 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 328 | 589 | 5.40169E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 324 | 591 | 9.2E-47 | IPR001245 |
| Pfam | PF01476 | LysM domain | 40 | 77 | 0.013 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 303 | 592 | 1.89E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 307 | 392 | 7.9E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 393 | 612 | 4.0E-57 | - |
| SMART | SM00220 | serkin_6 | 322 | 594 | 1.1E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 595 | 39.212677 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 350 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 437 | 449 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 296 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_024959489.1 | lysM domain receptor-like kinase 3 isoform X1 [Cynara cardunculus var. scolymus] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6MYA6 | Chitin elicitor receptor kinase 1 OS=Mikania micrantha OX=192012 GN=E3N88_27667 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology