Basic Information
Locus ID:
Ftri14G28045
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 6024229 | 6025965 | - | Ftri14G28045 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 35,129.11 Da | 34.15 | 87.91 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 29 | 294 | 3.9E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 297 | 5.53E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 104 | 305 | 3.5E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 102 | 7.0E-32 | - |
| SMART | SM00220 | serkin_6 | 24 | 300 | 2.2E-34 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 17 | 306 | 9.1E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 24 | 300 | 35.269291 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 30 | 55 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 146 | 158 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38990.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_022031288.1 | receptor-like protein kinase HERK 1 [Helianthus annuus] | 0 |
| Q9FID9 | Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana OX=3702 GN=At5g38990 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251VBE9 | Putative concanavalin A-like lectin/glucanase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0081501 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 30 | Ftri11G25505, Ftri12G15517, Ftri14G01992, Ftri14G04619 ... |