Basic Information
Locus ID:
Ftri14G20668
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 3657829 | 3663927 | + | Ftri14G20668 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.84 | 69,629.74 Da | 49.86 | 80.24 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 116 | 204 | 2.45627E-10 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 432 | 580 | 2.9E-38 | IPR001245 |
| Pfam | PF00989 | PAS fold | 96 | 204 | 3.8E-13 | IPR013767 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 419 | 584 | 3.78E-50 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 96 | 204 | 4.89E-16 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 424 | 508 | 3.9E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 596 | 1.3E-24 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 106 | 209 | 1.2E-19 | - |
| SMART | SM00091 | pas_2 | 94 | 161 | 0.0041 | IPR000014 |
| SMART | SM00220 | serkin_6 | 431 | 616 | 1.0E-11 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 111 | 206 | 4.7E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 431 | 616 | 29.007927 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 96 | 164 | 12.131429 | IPR000014 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 437 | 458 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 550 | 562 | - | IPR008271 |
| Coils | Coil | Coil | 26 | 53 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.2 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021977405.1 | probable serine/threonine-protein kinase DDB_G0271682 isoform X1 [Helianthus annuus] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251U6V0 | Putative PAS domain-containing protein tyrosine kinase family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0223791 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology