Basic Information
Locus ID:
Ftri14G20637
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 902282 | 905405 | - | Ftri14G20637 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 74,466.85 Da | 30.96 | 103.65 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 415 | 675 | 2.16783E-88 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 413 | 675 | 9.5E-34 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 74 | 9.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 150 | 209 | 4.9E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 676 | 5.69E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 241 | 7.94E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 257 | 2.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 188 | 8.3E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 681 | 1.4E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 487 | 1.8E-23 | - |
| SMART | SM00220 | serkin_6 | 409 | 676 | 2.9E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 409 | 676 | 26.36487 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 306 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_022030200.1 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 [Helianthus annuus] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251VD17 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0093941 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology