Basic Information
Locus ID:
Ftri14G19212
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 11728304 | 11730353 | - | Ftri14G19212 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 47,585.39 Da | 37.49 | 85.84 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 232 | 361 | 5.2E-13 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 70 | 188 | 1.6E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 65 | 210 | 2.49E-17 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 226 | 361 | 4.05E-18 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 229 | 361 | 1.3E-10 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 57 | 209 | 4.7E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 95 | 210 | 0.27 | IPR000782 |
| SMART | SM00554 | fasc_3 | 257 | 362 | 1.1E-14 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 219 | 359 | 11.621765 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 59 | 207 | 10.956114 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 369 | 419 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_022028417.1 | fasciclin-like arabinogalactan protein 2 [Helianthus annuus] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6MX98 | Fasciclin-like arabinogalactan protein 2 OS=Mikania micrantha OX=192012 GN=E3N88_27619 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology