Basic Information
Locus ID:
Ftri14G18322
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 10263290 | 10267473 | + | Ftri14G18322 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 93,055.63 Da | 48.59 | 81.59 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 685 | 720 | 0.016 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 611 | 636 | 8.3E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 524 | 550 | 0.09 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 312 | 9.32E-21 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 519 | 821 | 7.33E-45 | IPR036322 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 83 | 320 | 1.4E-24 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 496 | 825 | 7.8E-113 | IPR015943 |
| SMART | SM00320 | WD40_4 | 596 | 636 | 2.2E-7 | IPR001680 |
| SMART | SM00220 | serkin_6 | 13 | 307 | 4.6E-5 | IPR000719 |
| SMART | SM00320 | WD40_4 | 639 | 678 | 1.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 507 | 551 | 0.26 | IPR001680 |
| SMART | SM00320 | WD40_4 | 682 | 720 | 6.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 729 | 768 | 2.4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 689 | 722 | 10.021053 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 307 | 11.693778 | IPR000719 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 689 | 722 | 12.01227 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 603 | 638 | 9.915599 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 603 | 645 | 12.74747 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 623 | 637 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 707 | 721 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 623 | 637 | 2.7E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 665 | 679 | 2.7E-5 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 707 | 721 | 2.7E-5 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 6 | 44 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_021997397.1 | protein SPA1-RELATED 4 [Helianthus annuus] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251T1A4 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=SPA3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology