Basic Information
Locus ID:
Ftri14G17097
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 3348812 | 3349847 | - | Ftri14G17097 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 18,992.03 Da | 13.42 | 111.98 | 0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 24 | 112 | 1.9895E-37 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 34 | 112 | 7.1E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 23 | 112 | 1.48E-27 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 22 | 124 | 1.0E-28 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 24 | 128 | 31.032581 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32300.1 | uclacyanin 1. Encodes a uclacyanin, a protein precursor that is closely related to precursors of stellacyanins and a blue copper protein from pea pods. | 0 |
| RefSeq | XP_022031513.1 | blue copper protein 1b [Helianthus annuus] | 0 |
| A0A072U307 | Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A251VBA5 | Putative cupredoxin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0087431 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology