Basic Information
Locus ID:
Ftri14G16593
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 4727320 | 4729237 | + | Ftri14G16593 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 52,193.07 Da | 58.92 | 76.08 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 48 | 204 | 2.0E-35 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 293 | 337 | 1.7E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 292 | 350 | 2.09E-16 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 290 | 351 | 2.1E-15 | IPR036638 |
| SMART | SM00353 | finulus | 294 | 343 | 3.4E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 288 | 337 | 16.443676 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 221 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 273 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_022029453.1 | transcription factor MYC2 [Helianthus annuus] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251V9V8 | Putative myc-type, basic helix-loop-helix (BHLH) domain, Transcription factor MYC/MYB N-terminal OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0086191 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology