Basic Information
Locus ID:
Ftri14G13731
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 5243674 | 5248972 | - | Ftri14G13731 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 61,827.17 Da | 56.95 | 75.34 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 349 | 388 | 0.15 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 308 | 343 | 2.0E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 437 | 473 | 6.7E-5 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 228 | 284 | 7.0E-6 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 180 | 484 | 7.32E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 169 | 478 | 7.6E-123 | IPR015943 |
| SMART | SM00320 | WD40_4 | 304 | 343 | 4.1E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 263 | 300 | 0.13 | IPR001680 |
| SMART | SM00320 | WD40_4 | 434 | 473 | 1.7E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 220 | 260 | 0.13 | IPR001680 |
| SMART | SM00320 | WD40_4 | 176 | 217 | 140.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 346 | 388 | 0.0035 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 441 | 474 | 11.919224 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 311 | 352 | 13.549507 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 311 | 343 | 10.943775 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 228 | 269 | 9.439068 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 441 | 474 | 14.41838 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 460 | 474 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_023753951.1 | protein FIZZY-RELATED 2 isoform X2 [Lactuca sativa] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6MWR7 | ANAPC4_WD40 domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_27098 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology