Basic Information
Locus ID:
Ftri14G13719
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 5271993 | 5273542 | + | Ftri14G13719 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 31,067.54 Da | 87.83 | 73.58 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 116 | 159 | 5.14593E-19 | - |
| Pfam | PF13639 | Ring finger domain | 116 | 159 | 7.1E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 96 | 168 | 4.89E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 95 | 166 | 2.6E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 117 | 158 | 4.4E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 117 | 159 | 12.120453 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 226 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16720.1 | TOXICOS EN LEVADURA 2. RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. | 0 |
| RefSeq | XP_024996423.1 | RING-H2 finger protein ATL2 [Cynara cardunculus var. scolymus] | 0 |
| Q8L9T5 | RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5N6MWF0 | RING-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_27102 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology