Basic Information
Locus ID:
Ftri14G12227
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 11506727 | 11512597 | - | Ftri14G12227 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 53,913.17 Da | 34.65 | 121.32 | 0.70 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 278 | 421 | 5.6E-16 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 90 | 245 | 1.8E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 119 | 257 | 9.4E-16 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 259 | 425 | 5.7E-18 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 60 | 424 | 4.5E-108 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 74 | 424 | 9.0E-94 | IPR004798 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_021982558.1 | vacuolar cation/proton exchanger 3 isoform X2 [Helianthus annuus] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A251TW79 | Vacuolar cation/proton exchanger OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0257471 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology