Basic Information
Locus ID:
Ftri14G11337
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
SPA1
Description:
suppressor of phya-105
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 4176648 | 4185273 | - | Ftri14G11337 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 100,236.78 Da | 40.69 | 81.98 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 752 | 787 | 0.048 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 217 | 422 | 1.05E-13 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 582 | 892 | 9.16E-50 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 553 | 895 | 2.3E-124 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 217 | 432 | 1.6E-17 | - |
| SMART | SM00320 | WD40_4 | 798 | 837 | 9.8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 749 | 787 | 1.9E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 663 | 703 | 4.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 706 | 745 | 0.34 | IPR001680 |
| SMART | SM00320 | WD40_4 | 620 | 660 | 0.08 | IPR001680 |
| SMART | SM00320 | WD40_4 | 854 | 893 | 45.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 571 | 610 | 0.55 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 627 | 669 | 10.107432 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 670 | 712 | 9.071468 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 756 | 789 | 12.246197 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 756 | 789 | 10.205597 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 774 | 788 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 647 | 661 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 774 | 788 | 1.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 690 | 704 | 1.0E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 647 | 661 | 1.0E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 150 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_022029358.1 | protein SPA1-RELATED 2 isoform X1 [Helianthus annuus] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A4P8PIQ1 | Protein kinase domain-containing protein OS=Ambrosia artemisiifolia OX=4212 GN=SPA PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology