Basic Information
Locus ID:
Ftri14G11112
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 105178406 | 105194689 | - | Ftri14G11112 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 115,744.36 Da | 41.44 | 87.86 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 789 | 963 | 1.6E-15 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 162 | 440 | 1.0E-33 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 468 | 739 | 9.7E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 794 | 971 | 5.53E-30 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 114 | 444 | 2.53E-52 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 750 | 4.18E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 548 | 759 | 3.8E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 228 | 457 | 1.6E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 786 | 989 | 8.2E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 93 | 226 | 5.2E-19 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 458 | 546 | 1.7E-28 | - |
| SMART | SM00220 | serkin_6 | 468 | 748 | 7.8E-34 | IPR000719 |
| SMART | SM00220 | serkin_6 | 131 | 447 | 1.4E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 131 | 444 | 29.389545 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 468 | 745 | 35.778114 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 591 | 603 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 474 | 499 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46290.1 | hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. | 0 |
| RefSeq | XP_035843093.1 | uncharacterized protein LOC118489675 [Helianthus annuus] | 0 |
| Q9LX66 | Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TE77 | Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr11g0352261 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |