Basic Information
Locus ID:
Ftri14G10346
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 9008228 | 9010949 | + | Ftri14G10346 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 20,765.18 Da | 62.60 | 75.14 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 72 | 141 | 1.3E-15 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 66 | 144 | 5.65E-20 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 40 | 144 | 2.2E-29 | - |
| SMART | SM00213 | ubq_7 | 72 | 143 | 0.0079 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 70 | 145 | 10.070333 | IPR000626 |
| Coils | Coil | Coil | 163 | 183 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_023741597.1 | small ubiquitin-related modifier 1 [Lactuca sativa] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2J6JYF9 | Small ubiquitin-related modifier OS=Lactuca sativa OX=4236 GN=LSAT_9X92540 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology