Basic Information
Locus ID:
Ftri14G05558
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 22871405 | 22880031 | - | Ftri14G05558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 78,694.63 Da | 43.32 | 96.38 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 2.1E-11 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 445 | 671 | 1.0E-19 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 443 | 691 | 2.78E-32 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 185 | 1.31E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 490 | 682 | 3.4E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 209 | 6.3E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 382 | 489 | 1.2E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 675 | 14.661919 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 335 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_035843427.1 | protein MALE DISCOVERER 2 isoform X1 [Helianthus annuus] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251V6Q4 | Putative leucine-rich repeat protein kinase family protein OS=Helianthus annuus OX=4232 GN=MRH1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology