Basic Information
Locus ID:
Ftri14G05518
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Carbohydrate-binding protein of the ER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 100471997 | 100475234 | + | Ftri14G05518 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 60,310.13 Da | 42.46 | 86.88 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 375 | 522 | 1.4E-15 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 45 | 300 | 4.0E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 345 | 522 | 4.85E-24 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 25 | 300 | 6.34E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 114 | 3.3E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 115 | 318 | 1.7E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 525 | 8.2E-21 | - |
| SMART | SM00220 | serkin_6 | 40 | 306 | 1.4E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 371 | 526 | 15.128341 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 307 | 33.135056 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 377 | 409 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 46 | 73 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04690.1 | Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. | 0 |
| RefSeq | XP_022027384.1 | receptor-like protein kinase ANXUR1 isoform X5 [Helianthus annuus] | 0 |
| Q9SR05 | Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana OX=3702 GN=ANX1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251V5B9 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0062921 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 9 | Ftri14G05518, Ftri14G19961, Ftri7G00942, Ftri7G02286 ... |