Basic Information
Locus ID:
Ftri13G28886
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 93609736 | 93614329 | + | Ftri13G28886 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 77,790.40 Da | 43.29 | 73.92 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 144 | 1.9E-60 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 416 | 555 | 6.8E-57 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 205 | 348 | 6.6E-62 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 211 | 350 | 1.13E-23 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 420 | 555 | 1.26E-20 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 5 | 148 | 1.57E-23 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 424 | 537 | 1.1E-13 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 149 | 9.1E-15 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 213 | 335 | 3.0E-14 | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_022020961.1 | uncharacterized protein LOC110921006 [Helianthus annuus] | 0 |
| TrEMBL | A0A5N6MP09 | Actin cross-linking OS=Mikania micrantha OX=192012 GN=E3N88_30257 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology