Basic Information
Locus ID:
Ftri13G25356
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-box FBD LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 102853290 | 102854696 | + | Ftri13G25356 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 53,457.91 Da | 45.20 | 102.67 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 21 | 84 | 6.28E-9 | IPR036047 |
| SUPERFAMILY | SSF52058 | L domain-like | 135 | 396 | 2.72E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 132 | 406 | 7.3E-8 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 21 | 74 | 8.941087 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42720.1 | FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_024995324.1 | putative F-box/LRR-repeat protein At5g02930 [Cynara cardunculus var. scolymus] | 0 |
| Q6DR13 | F-box/LRR-repeat protein At2g42720 OS=Arabidopsis thaliana OX=3702 GN=At2g42720 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6MPH1 | F-box domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_31242 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology