Basic Information
Locus ID:
Ftri13G21662
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
NIK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 91517021 | 91520925 | + | Ftri13G21662 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 68,807.61 Da | 38.45 | 96.25 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 305 | 571 | 1.6E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 72 | 2.8E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 124 | 183 | 5.9E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 282 | 574 | 4.86E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 197 | 1.45E-37 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 273 | 380 | 1.9E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 214 | 1.7E-56 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 381 | 593 | 1.3E-61 | - |
| SMART | SM00220 | serkin_6 | 304 | 559 | 1.4E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 304 | 559 | 36.159733 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | 6.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 310 | 332 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 584 | 608 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 608 | - | - |
| Coils | Coil | Coil | 624 | 624 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_021998797.1 | protein NSP-INTERACTING KINASE 1 [Helianthus annuus] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6MN33 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_30200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology