Basic Information
Locus ID:
Ftri13G19678
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 100752564 | 100757030 | + | Ftri13G19678 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.66 | 60,862.29 Da | 41.92 | 102.40 | 0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 35 | 445 | 1.8E-56 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 148 | 199 | 2.0E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 26 | 469 | 1.4E-79 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 100 | 114 | 9.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 86 | 97 | 9.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 115 | 123 | 9.9E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 155 | 165 | 9.9E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_022025961.1 | sodium/hydrogen exchanger 2 [Helianthus annuus] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6MNX7 | Sodium/hydrogen exchanger OS=Mikania micrantha OX=192012 GN=E3N88_31062 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology