Basic Information
Locus ID:
Ftri13G18578
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Guard cell S-type anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 96152409 | 96154319 | - | Ftri13G18578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 62,893.41 Da | 43.96 | 88.28 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 210 | 501 | 4.99653E-100 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 211 | 502 | 1.1E-30 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 207 | 512 | 1.2E-54 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_024994696.1 | guard cell S-type anion channel SLAC1 [Cynara cardunculus var. scolymus] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6MLY3 | Guard cell S-type anion channel SLAC1 OS=Mikania micrantha OX=192012 GN=E3N88_30484 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology