Basic Information
Locus ID:
Ftri13G12981
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 85683505 | 85685991 | + | Ftri13G12981 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 36,128.18 Da | 43.61 | 70.86 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 52 | 329 | 2.0E-88 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 214 | 319 | 1.03E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 214 | 332 | 8.8E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 218 | 322 | 26.801849 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 80 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_021998378.1 | auxin-responsive protein IAA8 [Helianthus annuus] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4P8PK45 | Auxin-responsive protein OS=Ambrosia artemisiifolia OX=4212 GN=IAA9-L PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology