Basic Information
Locus ID:
Ftri13G12329
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 96837158 | 96839033 | - | Ftri13G12329 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 51,490.55 Da | 40.45 | 85.59 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 27 | 105 | 2.8279E-18 | - |
| Pfam | PF02214 | BTB/POZ domain | 27 | 113 | 6.4E-13 | IPR003131 |
| SUPERFAMILY | SSF75011 | 3-carboxy-cis,cis-mucoante lactonizing enzyme | 120 | 358 | 6.67E-11 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 25 | 113 | 1.1E-15 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 116 | 366 | 3.3E-7 | IPR015943 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 20 | 115 | 1.5E-18 | IPR011333 |
| SMART | SM00225 | BTB_4 | 25 | 122 | 6.2E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 25 | 90 | 8.875624 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_024995633.1 | BTB/POZ domain-containing protein At5g41330-like [Cynara cardunculus var. scolymus] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A103XR89 | BTB/POZ fold OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_002532 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology