Basic Information
Locus ID:
Ftri13G12231
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-box protein SKIP14-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 94835499 | 94838235 | + | Ftri13G12231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 41,564.69 Da | 43.57 | 83.53 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 97 | 139 | 3.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 97 | 140 | 5.36E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 96 | 134 | 3.7E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 271 | 7.9E-8 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 97 | 137 | 8.570165 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_022020963.1 | F-box protein SKIP14 [Helianthus annuus] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251RP97 | Putative RNI-like superfamily protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0549551 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology