Basic Information
Locus ID:
Ftri13G06477
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 103506721 | 103521839 | - | Ftri13G06477 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 121,755.77 Da | 36.21 | 77.44 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 448 | 693 | 7.16089E-134 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 840 | 1103 | 1.3E-116 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 476 | 609 | 3.7E-30 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 470 | 610 | 6.66E-18 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 444 | 693 | 8.5E-58 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 353 | 1107 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 473 | 702 | 32.738964 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 391 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 735 | 758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 376 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 773 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 354 | - | - |
| Coils | Coil | Coil | 797 | 833 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_021972364.1 | translocase of chloroplast 120, chloroplastic [Helianthus annuus] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6MP38 | AIG1-type G domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_31319 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology