Basic Information
Locus ID:
Ftri13G03647
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 101226878 | 101232516 | + | Ftri13G03647 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.54 | 86,903.61 Da | 45.55 | 77.31 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 286 | 354 | 3.3E-12 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 371 | 464 | 5.3E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 149 | 239 | 4.1E-10 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 540 | 741 | 6.5E-47 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 45 | 131 | 2.0E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 519 | 756 | 3.69E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 365 | 466 | 3.6E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 500 | 614 | 5.8E-33 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 31 | 133 | 3.1E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 260 | 356 | 7.7E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 144 | 242 | 1.1E-14 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 615 | 770 | 4.3E-48 | - |
| SMART | SM00220 | serkin_6 | 539 | 768 | 2.6E-34 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 361 | 467 | 13.77322 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 255 | 356 | 15.402598 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 539 | 771 | 39.142006 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 137 | 242 | 14.080992 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 32 | 133 | 15.574588 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 545 | 567 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 660 | 672 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_023733718.2 | cysteine-rich receptor-like protein kinase 2 [Lactuca sativa] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6L8M0 | Cysteine-rich receptor-like protein kinase 25 OS=Mikania micrantha OX=192012 GN=E3N88_45840 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology