HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Ftri13G02788
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr13 61263415 61263955 + Ftri13G02788
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.13 16,677.26 Da 60.33 66.01 -1.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 107 143 - -
MobiDBLite mobidb-lite consensus disorder prediction 77 96 - -
MobiDBLite mobidb-lite consensus disorder prediction 111 125 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021998170.1 protein FAR1-RELATED SEQUENCE 5-like [Helianthus annuus] 0
TrEMBL A0A5N6PRD6 SWIM-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_06315 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asteraceae Flaveria trinervia 44 Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ...
Ftri11G28932, Ftri12G02740, Ftri12G23135, Ftri12G30949, Ftri12G31882, Ftri13G00300, Ftri13G02788, Ftri13G14475, Ftri14G08431, Ftri14G17396, Ftri14G24276, Ftri15G17861, Ftri15G23176, Ftri15G26300, Ftri16G02063, Ftri16G05055, Ftri16G11082, Ftri16G11904, Ftri16G22178, Ftri16G22966, Ftri16G29932, Ftri16G32504, Ftri17G07867, Ftri2G01229, Ftri3G05569, Ftri4G07590, Ftri4G10090, Ftri4G15855, Ftri4G18820, Ftri5G06459, Ftri5G23007, Ftri6G19831, Ftri7G15215, Ftri7G18898, Ftri7G21702, Ftri8G00461, Ftri8G00988, FtriNA13922, FtriNA22465, FtriNA26942
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.