Basic Information
Locus ID:
Ftri13G00522
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
f-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 101460529 | 101462032 | - | Ftri13G00522 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.76 | 36,536.68 Da | 45.18 | 82.29 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01753 | MYND finger | 283 | 322 | 2.0E-6 | IPR002893 |
| SUPERFAMILY | SSF81383 | F-box domain | 31 | 81 | 2.75E-5 | IPR036047 |
| SUPERFAMILY | SSF81901 | HCP-like | 94 | 210 | 2.35E-10 | - |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 275 | 327 | 1.92E-9 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 44 | 222 | 4.7E-15 | IPR011990 |
| Gene3D | G3DSA:6.10.140.2220 | - | 277 | 329 | 1.9E-9 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 280 | 322 | 10.479195 | IPR002893 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67340.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | XP_021970085.1 | F-box protein At1g67340 [Helianthus annuus] | 0 |
| Q9FYF9 | F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6LCM4 | MYND-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_44220 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology