HalophFGD

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Basic Information
Locus ID: Ftri13G00300
Species & Taxonomic ID: Flaveria trinervia & 4227
Genome Assembly: GCA_025506515.1
Description: Protein FAR1-RELATED SEQUENCE 5-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr13 75456694 75458865 + Ftri13G00300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.12 47,956.10 Da 47.00 81.88 -0.30
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS50966 Zinc finger SWIM-type profile. 202 248 9.309643 IPR007527
Coils Coil Coil 299 319 - -
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
KEGG Pathway
KO Term:
K17604 (zinc finger SWIM domain-containing protein 3)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021971663.1 protein FAR1-RELATED SEQUENCE 5-like [Helianthus annuus] 0
TrEMBL A0A5N6PZ54 Protein FAR1-RELATED SEQUENCE OS=Mikania micrantha OX=192012 GN=E3N88_00539 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Asteraceae Flaveria trinervia 44 Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ...
Ftri11G28932, Ftri12G02740, Ftri12G23135, Ftri12G30949, Ftri12G31882, Ftri13G00300, Ftri13G02788, Ftri13G14475, Ftri14G08431, Ftri14G17396, Ftri14G24276, Ftri15G17861, Ftri15G23176, Ftri15G26300, Ftri16G02063, Ftri16G05055, Ftri16G11082, Ftri16G11904, Ftri16G22178, Ftri16G22966, Ftri16G29932, Ftri16G32504, Ftri17G07867, Ftri2G01229, Ftri3G05569, Ftri4G07590, Ftri4G10090, Ftri4G15855, Ftri4G18820, Ftri5G06459, Ftri5G23007, Ftri6G19831, Ftri7G15215, Ftri7G18898, Ftri7G21702, Ftri8G00461, Ftri8G00988, FtriNA13922, FtriNA22465, FtriNA26942
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.