Basic Information
Locus ID:
Ftri12G32636
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 125904139 | 125936665 | - | Ftri12G32636 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.98 | 159,394.63 Da | 44.07 | 87.42 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14299 | Phloem protein 2 | 1265 | 1377 | 3.5E-12 | IPR025886 |
| Pfam | PF14299 | Phloem protein 2 | 620 | 759 | 2.5E-17 | IPR025886 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 23 | 158 | 2.5E-30 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 279 | 484 | 1.3E-27 | IPR001245 |
| Pfam | PF14299 | Phloem protein 2 | 1022 | 1139 | 3.2E-12 | IPR025886 |
| Pfam | PF14299 | Phloem protein 2 | 814 | 958 | 5.0E-9 | IPR025886 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 29 | 253 | 7.79E-47 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 256 | 556 | 1.12E-48 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 354 | 570 | 3.4E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 86 | 160 | 5.9E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 85 | 1.6E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 256 | 7.4E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 257 | 352 | 5.6E-20 | - |
| SMART | SM00220 | serkin_6 | 10 | 250 | 1.3E-11 | IPR000719 |
| SMART | SM00220 | serkin_6 | 274 | 560 | 7.1E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 274 | 567 | 26.647549 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 250 | 21.912659 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46290.1 | hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. | 0 |
| RefSeq | XP_043608545.1 | uncharacterized protein LOC122580338 [Erigeron canadensis] | 0 |
| Q9LX66 | Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2U1PZV3 | Serine/threonine-protein kinase, active site protein OS=Artemisia annua OX=35608 GN=CTI12_AA091850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 23 | Ftri11G02011, Ftri11G04674, Ftri11G06046, Ftri11G12255 ... |