Basic Information
Locus ID:
Ftri12G31126
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 442446 | 445069 | + | Ftri12G31126 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.43 | 21,275.44 Da | 54.70 | 79.59 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 162 | 194 | 1.23894E-14 | - |
| Pfam | PF19026 | HYPK UBA domain | 162 | 194 | 3.4E-9 | IPR044034 |
| Pfam | PF01849 | NAC domain | 67 | 122 | 4.1E-23 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 160 | 193 | 4.7E-16 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 73 | 126 | 8.4E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 67 | 123 | 1.6E-27 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 32 | 162 | 1.9E-40 | IPR016641 |
| PIRSF | PIRSF015901 | NAC_alpha | 155 | 195 | 1.8E-13 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 64 | 129 | 18.311571 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 76 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_023517576.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Cucurbita pepo subsp. pepo] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6MDZ9 | NAC-A/B domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_34167 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology