Basic Information
Locus ID:
Ftri12G30739
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 124667338 | 124674785 | - | Ftri12G30739 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 102,066.35 Da | 45.69 | 76.20 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 208 | 260 | 3.9E-13 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 450 | 500 | 8.3E-16 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 519 | 560 | 5.0E-7 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 598 | 660 | 1.57E-8 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 503 | 560 | 1.79E-14 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 599 | 663 | 6.6E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 503 | 577 | 1.4E-15 | IPR013083 |
| SMART | SM00249 | PHD_3 | 607 | 660 | 0.0013 | IPR001965 |
| SMART | SM00249 | PHD_3 | 518 | 559 | 4.7E-9 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 516 | 561 | 10.1931 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 519 | 558 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 49 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36720.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021985981.1 | increased DNA methylation 1 isoform X2 [Helianthus annuus] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6P4M1 | PHD-type domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_14485 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology